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GMA News

03.01.2007
GMA Collaborates with Emory U. on Factor VIII MabsNew Factor VIII Mabs (click here)

DNA Sequencing Variable Regions

Want to know more about your antibodies?  From mRNA to protein sequence…let our experts do the decoding! 

Our molecular biology services:

  • Messenger RNA isolation from hybridoma cells.
  • DNA sequencing of immunoglobulin heavy and light chain variable regions.
  • Edman Degradation for sequence confirmation.
  • Cloning of variable region DNA into vectors followed by transformation into competent cells. 

Benefits:

  • Sequencing can provide valuable insight on the structure of you antibody. 
  • Knowing the structure of your antibody can shed light on its interactions with other molecules.

Common applications:

  • Patents – documenting your antibody sequence helps to protect your discovery.
  • Differentiating antibodies made to a common target.

Technique:

At GMA, we employ a rigorous strategy to ensure that your antibody sequence is accurate!  We begin by isolating only cytoplasmic, processed RNA – free of genomic DNA contamination.  This is followed by a 5’ RACE method, allowing for amplification of the 5’ end of the variable region, which is traditionally difficult to prime.  This method, in combination with a set of nested PCR’s using gene specific primers extending from the constant region, results in complete variable region sequences.

Reliability:

All sequencing done at GMA has been crossed referenced with protein sequence obtained via Edman Degradation at an independent facility.  Sequences have matched 100%.  We also reference the guidelines provided by http://www.bioinf.org.uk/abs/ to locate and highlight the complementarity determining regions (CDR’s).  All sequences generated have contained the pattern of amino acids, or landmarks, most commonly surrounding the CDR’s.

Presentation:

Data is presented in both a nucleotide sequence and a protein sequence format. 

Your results will be emailed to you within 2-4 weeks.

Contact us.

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